phenote.dataadapter.worm
Class WormReferenceGroupAdapter

java.lang.Object
  phenote.dataadapter.OntologyMaker
      phenote.dataadapter.AbstractGroupAdapter
          phenote.dataadapter.worm.WormReferenceGroupAdapter

All Implemented Interfaces:

GroupAdapterI, OntologyMakerI

public class WormReferenceGroupAdapter
extends AbstractGroupAdapter

Constructor Summary

WormReferenceGroupAdapter(java.lang.String group)

Method Summary

static java.lang.String	find(java.lang.String patternStr, java.lang.CharSequence input)
(package private) static java.lang.String[]	getPubPersonNBPFromReference(java.lang.String reference, java.lang.String joinkey)
protected java.lang.String	makeNameFromChar(CharacterI c) This is where subclasses come in and do their thing
(package private) static java.lang.String	makeNameFromPubPersonNBP(java.lang.String pubID, java.lang.String title, java.lang.String personID, java.lang.String name, java.lang.String nbp)
protected boolean	recordsId()
protected void	setIdField(CharacterI c, java.lang.String id) this should be read only and probably hidden

Methods inherited from class phenote.dataadapter.AbstractGroupAdapter

getCharChangeListener, getCharListChangeListener, getNamespace, hasCharChangeListener, hasCharListChangeListener, makeOboClassFromChar, makeOntology, setCharChangeListener, setCharListChangeListener

Methods inherited from class phenote.dataadapter.OntologyMaker

addDestinationField, getButtonText, hasDestinationCharField, setOboSession, setOboSession, useButtonToLaunch

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface phenote.dataadapter.OntologyMakerI

addDestinationField, getButtonText, useButtonToLaunch

Constructor Detail

WormReferenceGroupAdapter

public WormReferenceGroupAdapter(java.lang.String group)

Method Detail

recordsId

protected boolean recordsId()

Overrides:

recordsId in class AbstractGroupAdapter

setIdField

protected void setIdField(CharacterI c,
                          java.lang.String id)

this should be read only and probably hidden

Overrides:

setIdField in class AbstractGroupAdapter

makeNameFromChar

protected java.lang.String makeNameFromChar(CharacterI c)

Description copied from class: AbstractGroupAdapter

This is where subclasses come in and do their thing

Specified by:

makeNameFromChar in class AbstractGroupAdapter

makeNameFromPubPersonNBP

static java.lang.String makeNameFromPubPersonNBP(java.lang.String pubID,
                                                 java.lang.String title,
                                                 java.lang.String personID,
                                                 java.lang.String name,
                                                 java.lang.String nbp)

getPubPersonNBPFromReference

static java.lang.String[] getPubPersonNBPFromReference(java.lang.String reference,
                                                       java.lang.String joinkey)

find

public static java.lang.String find(java.lang.String patternStr,
                                    java.lang.CharSequence input)