phenote.datamodel
Interface AnnotationMappingDriver

All Known Implementing Classes:

BasicAnnotationMappingDriver, DefaultMappingDriver, EnvironmentalSampleAssociationMappingDriver, PhenotypeAssociationMappingDriver

public interface AnnotationMappingDriver

Method Summary

void	addHistoryItem(org.obo.history.HistoryItem item)
void	clearProperty(org.obo.annotation.datamodel.Annotation annotation, org.obo.datamodel.OBOProperty property)
boolean	getAuditHistoryMode()
boolean	getChangeObjectsMode()
CharFieldValue	getCharFieldValue(org.obo.datamodel.OBOClass oboclass, CharacterI character, CharField field)
CharFieldValue	getCharFieldValue(java.lang.String s, CharacterI character, CharField field)
org.obo.datamodel.OBOProperty	getDefaultRelationship()
org.obo.datamodel.OBOProperty	getPropertyForField(CharField cf)
boolean	isObjectDifferentiaField(CharField cf)
boolean	isObjectField(CharField cf)
boolean	isObjectGenusField(CharField cf)
boolean	isSubjectField(CharField cf)
java.util.List<org.obo.history.HistoryItem>	popHistoryList()
void	setPropertyValue(org.obo.annotation.datamodel.Annotation annotation, org.obo.datamodel.OBOProperty property, org.obo.datamodel.OBOClass value)
void	setPropertyValue(org.obo.annotation.datamodel.Annotation annotation, org.obo.datamodel.OBOProperty property, java.lang.String value)

Method Detail

getPropertyForField

org.obo.datamodel.OBOProperty getPropertyForField(CharField cf)

getCharFieldValue

CharFieldValue getCharFieldValue(org.obo.datamodel.OBOClass oboclass,
                                 CharacterI character,
                                 CharField field)

getCharFieldValue

CharFieldValue getCharFieldValue(java.lang.String s,
                                 CharacterI character,
                                 CharField field)

setPropertyValue

void setPropertyValue(org.obo.annotation.datamodel.Annotation annotation,
                      org.obo.datamodel.OBOProperty property,
                      org.obo.datamodel.OBOClass value)

setPropertyValue

void setPropertyValue(org.obo.annotation.datamodel.Annotation annotation,
                      org.obo.datamodel.OBOProperty property,
                      java.lang.String value)

clearProperty

void clearProperty(org.obo.annotation.datamodel.Annotation annotation,
                   org.obo.datamodel.OBOProperty property)

getDefaultRelationship

org.obo.datamodel.OBOProperty getDefaultRelationship()

isSubjectField

boolean isSubjectField(CharField cf)

isObjectField

boolean isObjectField(CharField cf)

isObjectGenusField

boolean isObjectGenusField(CharField cf)

isObjectDifferentiaField

boolean isObjectDifferentiaField(CharField cf)

getAuditHistoryMode

boolean getAuditHistoryMode()

getChangeObjectsMode

boolean getChangeObjectsMode()

popHistoryList

java.util.List<org.obo.history.HistoryItem> popHistoryList()

addHistoryItem

void addHistoryItem(org.obo.history.HistoryItem item)