phenote.matrix.model
Class PhenotypeMatrixColumn

java.lang.Object
  phenote.matrix.model.PhenotypeMatrixColumn

All Implemented Interfaces:

MatrixColumn

public class PhenotypeMatrixColumn
extends java.lang.Object
implements MatrixColumn

Constructor Summary

PhenotypeMatrixColumn(org.obo.datamodel.OBOClass entity, org.obo.datamodel.OBOClass quality, org.obo.datamodel.OBOClass entity2)
Creates a new PhenotypeMatrixColumn object with the given entity, quality, and entity2 OBOClass objects

Method Summary

boolean	equals(java.lang.Object o)
org.obo.datamodel.OBOClass	getEntity()
org.obo.datamodel.OBOClass	getEntity2()
org.obo.datamodel.OBOClass	getQuality()
java.lang.Object	getValue(CharacterI character)
int	hashCode()
boolean	isValue(CharacterI character) Determines whether or not a given character contains the same values as the column
void	setEntity(org.obo.datamodel.OBOClass entity)
void	setEntity2(org.obo.datamodel.OBOClass entity2)
void	setQuality(org.obo.datamodel.OBOClass quality)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

PhenotypeMatrixColumn

public PhenotypeMatrixColumn(org.obo.datamodel.OBOClass entity,
                             org.obo.datamodel.OBOClass quality,
                             org.obo.datamodel.OBOClass entity2)

Creates a new PhenotypeMatrixColumn object with the given entity, quality, and entity2 OBOClass objects

Parameters:

entity - the entity to use for this matrix column

quality - the quality to use for this matrix column

entity2 - the additional entity to use for this matrix column

Method Detail

isValue

public boolean isValue(CharacterI character)

Determines whether or not a given character contains the same values as the column

Specified by:

isValue in interface MatrixColumn

Parameters:

character - the character to be tested

Returns:

a Boolean value indicating the validity of the Character as a column value

getValue

public java.lang.Object getValue(CharacterI character)

Specified by:

getValue in interface MatrixColumn

Parameters:

character - the character to be used as the basis of the matrix cell

Returns:

the given character as a PhenotypeMatrixCell object

setEntity

public void setEntity(org.obo.datamodel.OBOClass entity)

Parameters:

entity - the entity (as an OBOClass object) to be used for this column

getEntity

public org.obo.datamodel.OBOClass getEntity()

Returns:

the entity (as an OBOClass object) for this column

setQuality

public void setQuality(org.obo.datamodel.OBOClass quality)

Parameters:

quality - the quality (as an OBOClass object) to be used for this column

getQuality

public org.obo.datamodel.OBOClass getQuality()

Returns:

the quality (as an OBOClass object) for this column

setEntity2

public void setEntity2(org.obo.datamodel.OBOClass entity2)

Parameters:

entity2 - the additional entity (as an OBOClass object) to be used for this column

getEntity2

public org.obo.datamodel.OBOClass getEntity2()

Returns:

the additional entity (as an OBOClass object) for this column

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

Returns:

an int value representing the hash code computation for the PhenotypeMatrixColumn

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

Parameters:

o - an Object to be compared to the current PhenotypeMatrixColumn object

Returns:

the Boolean value indicating whether or not the Object is equivalent to the PhenotypeMatrixColumn

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object