phenote.matrix.model
Class PhenotypeMatrixRow

java.lang.Object
  phenote.matrix.model.PhenotypeMatrixRow

All Implemented Interfaces:

MatrixRow

public class PhenotypeMatrixRow
extends java.lang.Object
implements MatrixRow

Constructor Summary

PhenotypeMatrixRow(org.obo.datamodel.OBOClass t)
Creates a new PhenotypeMatrixRow based on the given Valid Taxon

Method Summary

boolean	equals(java.lang.Object o)
org.obo.datamodel.OBOClass	getTaxon()
java.lang.Object	getValue(CharacterI character)
int	hashCode()
boolean	isValue(CharacterI character) Determines whether or not a given character contains the same values as the matrix row
void	setTaxon(org.obo.datamodel.OBOClass taxon)

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PhenotypeMatrixRow

public PhenotypeMatrixRow(org.obo.datamodel.OBOClass t)

Creates a new PhenotypeMatrixRow based on the given Valid Taxon

Parameters:

t - the taxon to use as the basis for this PhenotypeMatrixRow

Method Detail

isValue

public boolean isValue(CharacterI character)

Determines whether or not a given character contains the same values as the matrix row

Specified by:

isValue in interface MatrixRow

Parameters:

character - the character to be tested

Returns:

a Boolean value indicating the validity of the Character as a row value

getValue

public java.lang.Object getValue(CharacterI character)

Specified by:

getValue in interface MatrixRow

Parameters:

character - - given a Character from the main data list

Returns:

the Valid Taxon OBOClass term representing the value of this row

setTaxon

public void setTaxon(org.obo.datamodel.OBOClass taxon)

Parameters:

taxon - the taxon (as an OBOClass object) to be used for this row in the matrix

getTaxon

public org.obo.datamodel.OBOClass getTaxon()

Returns:

the taxon (as an OBOClass object) of the current row in the matrix

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

Returns:

an int value representing the hash code computation for the PhenotypeMatrixRow

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

Parameters:

o - an Object to be compared to the current PhenotypeMatrixRow object

Returns:

the Boolean value indicating whether or not the Object is equivalent to the PhenotypeMatrixRow